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American Heart Association

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Final ID: We135

Mechanistic Modeling Identifies Novel Regulators of Cardiac Hypertrophy

Abstract Body: Introduction
Cardiac hypertrophy is a leading predictor of heart failure. The mechanisms that drive cardiac hypertrophy are poorly understood from a molecular and cellular perspective, due to the lack of knowledge of the governing signaling.

Hypothesis and Aims
I hypothesize that there exist genes that regulate hypertrophy beyond the field’s current understanding that can be identified by combining the publicly available, high-throughput International Mouse Phenotyping Consortium (IMPC) database with network modeling. I aim to use a large-scale network model of cardiac hypertrophy to assess the IMPC genes’ effects on hypertrophic phenotypes and validate these findings in vitro to identify novel regulators.

Materials & Methods
The IMPC was established by worldwide mouse clinics using in vivo models to perform single gene knockout experiments with primary phenotyping, forming a database with ~9000 genes, ~1000 of which can be associated with cardiac hypertrophy. 1st neighbors (genes directly interacting with the hypertrophy network model as evidenced by protein-protein interaction databases) were identified and effects on hypertrophy were assessed through the IMPC and network model knockdown simulations. When both methods suggested hypertrophic regulation, a gene was considered a candidate regulator. siRNA experiments are being performed in neonatal rat cardiomyocytes for validation. High-content imaging and qPCR are used to quantify changes in phenotype and confirm gene knockdown.

Results
Combining the IMPC with protein-protein interaction data, 37 1st neighbor genes were identified. Knockdown simulation identified 2 genes (LRIG1, CBL) as negative regulators. 3 genes (VAV2, LEPR, RASA1) were identified as positive regulators. These genes became candidates for in vitro validation given the network-wide hypertrophic effects enacted by their knockdowns. siRNA experiments are being optimized to fully validate modeling findings.

Conclusions
Mechanistic modeling identified 5 genes as novel regulators of cardiac hypertrophy. Sensitivity analysis highlighted known influencers of hypertrophy in the knockdown context. siRNA knockdown experiments are being performed to validate the model predictions.
  • Watkins, Lionel  ( University of Virginia , Charlottesville , Virginia , United States )
  • Saucerman, Jeffrey  ( UNIVERSITY VIRGINIA , Charlottesvle , Virginia , United States )
  • Author Disclosures:
    Lionel Watkins: DO NOT have relevant financial relationships | Jeffrey Saucerman: No Answer
Meeting Info:

Basic Cardiovascular Sciences

2024

Chicago, Illinois

Session Info:

Poster Session and Reception 3

Wednesday, 07/24/2024 , 04:30PM - 07:00PM

Poster Session and Reception

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