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American Heart Association

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Final ID: 78

Evaluation of AneuScreenTM, a Blood-Based Gene Expression Diagnostic for Intracranial Aneurysm

Abstract Body: Introduction: Intracranial aneurysm (IA), a cerebrovascular disease affecting 3-5% of US population, leads to subarachnoid hemorrage. A non-invasive diagnostic to identify those with an IA could facilitate more widespread screening and better disease management.

Objective: We have designed a PCR-based diagnostic assay for IA, AneuScreenTM, that is comprised of a previously-published 50-gene panel. This project aimed to further develop the assay’s predictive model in a large cohort and its predictive power in independent cases.

Methods: Before testing, the assay underwent rigorous standardization to test signal strength, dynamic range and linearity, and variation across replicates. Blood from consenting individuals with/without IA (angiogram confirmed) were collected under IRB approval from University at Buffalo, University of Pennsylvania, and University of South Florida. One mL of blood was collected into DxTerity RNA-stabilizing blood tube. After running each sample on the assay and standardizing data, gene expression levels of all 50 genes (as well as gene ratios and patient data) were used for support vector machine (SVM) model development in 85% of the data. Top 50 features selected by statistical filtering and ranking were used in nested loops to maximize training performance. Optimal model was validated in remaining 15% of samples.

Results: We enrolled 497 individuals (276 had IAs). In training, 12 features were most important. The final SVM model performed well in testing set without showing evidence of overfitting, achieving an AUC of 0.74. In independent validation set, the model reached an AUC of 0.80 (Fig. 1A and B).

Conclusion: SVM model developed using expression data from AneuScreenTM in a large cohort of individuals with and without IA was able to predict IA cases with an AUC of 0.80. This demonstrates the potential of using circulating blood to screen for IA presence. Additional testing is required to finetune model and improve accuracy.
  • Tutino, Vincent  ( University at Buffalo , Bowmansville , New York , United States )
  • Poppenberg, Kerry  ( University at Buffalo , Bowmansville , New York , United States )
  • Santo, Briana  ( University at Buffalo , Bowmansville , New York , United States )
  • Lai, Rosalind  ( University at Buffalo , Bowmansville , New York , United States )
  • Burkhardt, Jan-karl  ( Penn Medicine, Philadelphia, PA , Gladwyne , Pennsylvania , United States )
  • Mokin, Maxim  ( UNIVERSITY SOUTH FLORIDA HEALTH , Tampa , Florida , United States )
  • Samaniego, Edgar  ( University of Iowa Hospitals , Iowa City , Iowa , United States )
  • Levy, Elad  ( UBNS INC , Williamsville, NY , New York , United States )
  • Siddiqui, Adnan  ( UNIVERSITY AT BUFFALO , Williamsville , New York , United States )
  • Author Disclosures:
    Vincent Tutino: DO NOT have relevant financial relationships | Kerry Poppenberg: DO NOT have relevant financial relationships | Briana Santo: DO NOT have relevant financial relationships | Rosalind Lai: No Answer | Jan-Karl Burkhardt: DO NOT have relevant financial relationships | Maxim Mokin: DO have relevant financial relationships ; Consultant:Imperative care, Medtronic, Rapid Pulse :Active (exists now) ; Ownership Interest:Bendit Technologies, Borvo medical, BrainQ, Endostream, Radical Catheter Technologies, Serenity medical, Synchron, Sim&Cure, QAS.AI, Quantanosis.AI :Active (exists now) | Edgar Samaniego: DO NOT have relevant financial relationships | Elad Levy: DO have relevant financial relationships ; Ownership Interest:NeXtGen Biologics:Active (exists now) ; Other (please indicate in the box next to the company name):Leadership Role: CNS, ABNS, UBNS:Active (exists now) ; Advisor:NextGen Biologics, Cognition Medical, Endostream Medical, IRRAS AB-Consultant Advisory Board:Active (exists now) ; Executive Role:Chief Medical Officer: Haniva Technology:Active (exists now) ; Independent Contractor:Honorarium: Medtronic, Penumbra, MicroVention, Integra:Active (exists now) ; Consultant:Clarion, GLG Consulting, Guidepoint Central, Medtronic, StimMed, Mosaic:Active (exists now) ; Other (please indicate in the box next to the company name):Ultrasonic Surgical Blade - Patent:Active (exists now) ; Ownership Interest:Dendrite:Active (exists now) ; Ownership Interest:Q’Apel:Active (exists now) ; Ownership Interest:Three Rivers Medical:Active (exists now) ; Ownership Interest:StimMed:Active (exists now) ; Ownership Interest:Imperative Care :Active (exists now) ; Ownership Interest:Cognition Medical :Active (exists now) ; Ownership Interest:Claret Medical:Active (exists now) ; Ownership Interest:RAPID Medical:Active (exists now) | Adnan Siddiqui: DO NOT have relevant financial relationships
Meeting Info:
Session Info:

Aneurysms and Vascular Malformations Oral Abstracts

Thursday, 02/06/2025 , 07:30AM - 09:00AM

Oral Abstract Session

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Histological and Transcriptomic Analysis of Ischemic Stroke Thrombi Identifies Neutrophil Extracellular Trap Enrichment as an Indicator of First Pass Outcome

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