Development of a Comprehensive Biobank of Human iPSC Lines for Open-Access Distribution to Academic Researchers
Abstract Body: Background Human induced pluripotent stem cells (iPSCs) have revolutionized biomedical, translational and toxicology research in many fields such as cardiovascular disease, development, aging, regeneration, cancer, personalized medicine, and many rare diseases. The need for obtaining iPSC lines with the associated donors’ clinical data and from patients of diverse genetic backgrounds has been greater than ever. Greenstone Biosciences Inc. (GSB) has built a curated biorepository to address this demand as an asset for the scientific community utilizing iPSCs.
Methods The GSB biobank curates clinical data, isolates peripheral blood mononuclear cells (PBMCs), reprograms and banks patient-specific iPSC lines, and performs quality assurance. Reprogramming of PBMCs to iPSCs is carried out using non-integrating Sendai virus encoding for Oct4, Sox2, Klf4, and c-Myc. We then rigorously validate all iPSCs for pluripotency using immunofluorescence of stemness markers, qRT-PCR, G-banding and SNP-based virtual karyotyping along with quality control methods recommended by the International Society for Stem Cell Research (ISSCR).
Results We have a growing repository of over 1,000 iPSC lines with various disease backgrounds across demographics. We have an equal distribution of sex with 54% male and 46% female patients. We have representation of various populations including White non-Hispanic (56.9%), Hispanic or Latino (14.1%), East Asian (8%), African American (6.6%), and South Asian (5.7%). While 10% of the repository are cells from healthy donors, the bulk of our repository cell lines represent inherited cardiovascular diseases with known genetic mutations including hypertrophic cardiomyopathy (HCM), dilated cardiomyopathy (DCM), long QT syndrome (LQTS) and many other rare conditions such as Brugada syndrome (BrS) and Duchenne’s muscular dystrophy (DMD). We have also established a simple material transfer agreement (MTA) making it extremely accessible for academic and other non-profit institutions.
Conclusions We introduce the Greenstone Biosciences iPSC Biobank, a biorepository containing >1,000 human iPSC lines with de-identified patient clinical information and genetic backgrounds. This invaluable resource will help support iPSC research among academic investigators and institutions in several clinical, therapeutic, regulatory and biomedical research fields.
Yan, Christopher
( Greenstone Biosciences
, Palo Alto
, California
, United States
)
Pang, Paul
( Greenstone Biosciences
, Palo Alto
, California
, United States
)
Herron, Todd
( Greenstone Biosciences
, Palo Alto
, California
, United States
)
Lai, Celine
( Greenstone Biosciences
, Palo Alto
, California
, United States
)
Yu, Rebecca
( Greenstone Biosciences
, San Jose
, California
, United States
)
Cook, Zach
( Greenstone Biosciences
, Palo Alto
, California
, United States
)
Shenoy, Sushma Prabhakar
( Greenstone Biosciences
, Palo Alto
, California
, United States
)
Dolivo, David
( Greenstone Biosciences
, Palo Alto
, California
, United States
)
Walther, Parker
( Greenstone Biosciences
, Palo Alto
, California
, United States
)
Zhuge, Yan
( STANFORD UNIV SCH OF MEDICINE
, Stanford
, California
, United States
)
Wu, Joseph
( STANFORD UNIV SCH OF MEDICINE
, Stanford
, California
, United States
)
Author Disclosures:
Christopher Yan:DO have relevant financial relationships
;
Employee:Greenstone Biosciences:Active (exists now)
| Paul Pang:No Answer
| Todd Herron:DO have relevant financial relationships
;
Employee:Greenstone Biosciences:Active (exists now)
; Advisor:Kataoka Corporation:Active (exists now)
; Advisor:StemBioSys, Inc.:Active (exists now)
| Celine Lai:No Answer
| Rebecca Yu:DO NOT have relevant financial relationships
| Zach Cook:DO NOT have relevant financial relationships
| Sushma Prabhakar Shenoy:DO NOT have relevant financial relationships
| David Dolivo:DO NOT have relevant financial relationships
| Parker Walther:No Answer
| Yan Zhuge:DO NOT have relevant financial relationships
| Joseph Wu:DO NOT have relevant financial relationships